nexml schema 0.9 ~/nexml/xsd/taxa/taxa.xsd

Skip to: Site menu | Main content

The future data exchange standard is here!

NeXML is an exchange standard for representing phyloinformatic data — inspired by the commonly used NEXUS format, but more robust and easier to process.

Process nexml data

Schema module documentation

~ / doc / schema-1 / taxa / taxa
rss | digg reddit del.icio.us facebook — Last updated: Tue Sep 23 12:49:28 IST 2014

Description

This module defines complex types for OTU objects and their container objects. These types are analogous to the "taxa" block in NEXUS files. They are used in the nexml schema, and in instance documents, to normalize the cardinality between nodes in trees and rows in matrices.

Other views (open in new window):

organisation chart inheritance tree | file hierarchy inclusions tree | xml schema code schema source

Complex types

Taxa

Inheritance

Taxa extends IDTagged.

Substructures
Definition source
  <xs:complexType name="Taxa">
    <xs:complexContent mixed="false">
      <xs:extension base="IDTagged">
        <xs:sequence>
          <xs:element maxOccurs="unbounded" minOccurs="0" name="otu" type="Taxon"/>
          <xs:element maxOccurs="unbounded" minOccurs="0" name="set" type="TaxonSet"/>
        </xs:sequence>
      </xs:extension>
    </xs:complexContent>
  </xs:complexType>

[ Back to top ]

Taxon

Inheritance

Taxon extends IDTagged.

Definition source
  <xs:complexType name="Taxon" sawsdl:modelReference="http://evolutionaryontology-dev.nescent.org/cdao.owl#TU">
    <xs:complexContent>
      <xs:extension base="IDTagged"/>
    </xs:complexContent>
  </xs:complexType>

[ Back to top ]

See also

~/nexml/xsd/taxa/taxa.xsd includes the following other files:

~/nexml/xsd/taxa/taxa.xsd is included in:

This page summarizes the contents of schema file "~/nexml/xsd/taxa/taxa.xsd". Generated on Tue Sep 23 12:49:35 2014.